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DEPDC5 and hepatitis C are reported together in 2 articles.
Gene
DEPDC5
- HGNC
- HGNC:18423
5articles
5mentions
2variants with confirmed gene link
Most co-reported phenotypes (articles)
Reported variants (articles · ClinVar status)
Phenotype
Hepatitis C
421articles
421mentions
12co-reported genes shown
Most co-reported genes (articles)
Counts are literature co-mentions in SaudiVarKB, not clinical or causal assertions. Gene details: HGNC; variant status: ClinVar via dbSNP.
Publications
2 records shown · first 60A variant in the MICA gene is associated with liver fibrosis progression in chronic hepatitis C through TGF-β1 dependent mechanisms.
PMID 30723271 | PMCID PMC6363805 | DOI 10.1038/s41598-018-35736-2 · Scientific reports · 2019 · 6 validated mentions
Evidence preview
| Type | Entity | Source evidence | Confidence | Extractor |
|---|---|---|---|---|
| gene | DEPDC5 | “Recently, two GWAS variants, MICA rs2596542 and DEPDC5 rs1012068 were identified as being associated with the development of HCV-induced hepatocellular carcinoma (HCC) in Japanese patients.” | 0.98 | hgnc_dict_v1 |
| phenotype | hepatitis C | “A variant in the MICA gene is associated with liver fibrosis progression in chronic hepatitis C through TGF-β1 dependent mechanisms.” | 0.98 | phenotype_alias_lexicon_v2 |
| gene | MICA | “A variant in the MICA gene is associated with liver fibrosis progression in chronic hepatitis C through TGF-β1 dependent mechanisms.” | 0.98 | hgnc_dict_v1 |
| phenotype | hepatocellular carcinoma | “Recently, two GWAS variants, MICA rs2596542 and DEPDC5 rs1012068 were identified as being associated with the development of HCV-induced hepatocellular carcinoma (HCC) in Japanese patients.” | 0.98 | phenotype_alias_lexicon_v2 |
Variations in DEPDC5 gene and its association with chronic hepatitis C virus infection in Saudi Arabia.
PMID 25551790 | PMCID PMC4311515 | DOI 10.1186/s12879-014-0632-y · BMC infectious diseases · 2014 · 6 validated mentions
Evidence preview
| Type | Entity | Source evidence | Confidence | Extractor |
|---|---|---|---|---|
| gene | DEPDC5 | “Variations in DEPDC5 gene and its association with chronic hepatitis C virus infection in Saudi Arabia.” | 0.98 | hgnc_dict_v1 |
| phenotype | hepatitis C | “Variations in DEPDC5 gene and its association with chronic hepatitis C virus infection in Saudi Arabia.” | 0.98 | phenotype_alias_lexicon_v2 |
| phenotype | hepatocellular carcinoma | “BACKGROUND: Variations at DEPDC5 gene have been recently reported as genetic markers associated with hepatocellular carcinoma (HCC) progression in chronic HCV-infected patients.” | 0.98 | phenotype_alias_lexicon_v2 |
| population | Saudi Arabia | “Variations in DEPDC5 gene and its association with chronic hepatitis C virus infection in Saudi Arabia. This study was conducted to assess the association of DEPDC5 variants with advanced liver cirrhosis and HCC development among chronic HCV-infected patients in Saudi Arabian population. METHODS: Six-hundred and one HCV-infected patients were genotyped for DEPDC5 polymorphisms (rs1012068 and rs5998152), in comparison with 592 non-infected healthy control subjects.” | 0.95 | saudi_context_rules_v1 |