Advanced search

Combine gene, variant, phenotype, region and year filters

Every result shows the extracted entities next to the sentences that support them; rows for the searched entities come first.

Transparent by designEvery result links extracted entities to its source sentence and publication identifier.
About your search

MSH6 and endometrial cancer are reported together in 3 articles.

Gene

MSH6

HGNC
HGNC:7329
20articles
20mentions
0variants with confirmed gene link
Most co-reported phenotypes (articles)
49articles
49mentions
12co-reported genes shown
Most co-reported genes (articles)

Counts are literature co-mentions in SaudiVarKB, not clinical or causal assertions. Gene details: HGNC; variant status: ClinVar via dbSNP.

Publications

3 records shown · first 60
TypeEntitySource evidenceConfidenceExtractor
geneMSH6“MMR staining showed preserved expression in MLH1 and PMS2 proteins, while MSH2 and MSH6 staining showed loss of protein expression.”0.98hgnc_dict_v1
phenotypeendometrial cancer“MTS increases the risk of developing skin and gastrointestinal tumors such as sebaceous adenomas (SAs), sebaceous carcinomas, colorectal cancer, endometrial cancer, and ovarian cancer.”0.98phenotype_alias_lexicon_v2
geneMLH1“MMR staining showed preserved expression in MLH1 and PMS2 proteins, while MSH2 and MSH6 staining showed loss of protein expression.”0.98hgnc_dict_v1
genePMS2“MMR staining showed preserved expression in MLH1 and PMS2 proteins, while MSH2 and MSH6 staining showed loss of protein expression.”0.98hgnc_dict_v1

Lynch Syndrome Identification in Saudi Cohort of Endometrial Cancer Patients Screened by Universal Approach.

PMID 36293153 | PMCID PMC9603045 | DOI 10.3390/ijms232012299 · International journal of molecular sciences · 2022 · 5 validated mentions
TypeEntitySource evidenceConfidenceExtractor
geneMSH6“Three ECs (0.7%) were found to be LS harboring germline pathogenic variants (PVs)/likely pathogenic variants (LPVs): two in the MSH2 gene and one in the MSH6 gene.”0.98hgnc_dict_v1
phenotypeendometrial cancer“Lynch Syndrome Identification in Saudi Cohort of Endometrial Cancer Patients Screened by Universal Approach.”0.98phenotype_alias_lexicon_v2
geneMLH1“To evaluate the frequency of LS in a cohort of EC patients from Saudi Arabia, a total of 436 EC cases were screened utilizing immunohistochemistry (IHC), MLH1 promoter methylation analysis and next-generation sequencing technology.”0.98hgnc_dict_v1
geneMSH2“Three ECs (0.7%) were found to be LS harboring germline pathogenic variants (PVs)/likely pathogenic variants (LPVs): two in the MSH2 gene and one in the MSH6 gene.”0.98hgnc_dict_v1
TypeEntitySource evidenceConfidenceExtractor
geneMSH6“Next generation sequencing, Sanger sequencing and Multiplex Ligation-dependent Probe Amplification were used to screen for germline variants in the MLH1, MSH2, MSH6 and PMS2 MMR genes.”0.98hgnc_dict_v1
phenotypeendometrial cancer“All carriers had a positive family history for CRC or endometrial cancer.”0.98phenotype_alias_lexicon_v2
geneMLH1“Next generation sequencing, Sanger sequencing and Multiplex Ligation-dependent Probe Amplification were used to screen for germline variants in the MLH1, MSH2, MSH6 and PMS2 MMR genes.”0.98hgnc_dict_v1
geneMSH2“Next generation sequencing, Sanger sequencing and Multiplex Ligation-dependent Probe Amplification were used to screen for germline variants in the MLH1, MSH2, MSH6 and PMS2 MMR genes.”0.98hgnc_dict_v1