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Publications

8 records shown · first 60

Exploring the GDP binding to KRas WT, G12C, G12D, G12R, and G12V and bound with MRTX1133 using steered molecular dynamics.

PMID 41636798 | DOI 10.1007/s00249-026-01817-8 · European biophysics journal : EBJ · 2026 · 4 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“Using steered molecular simulations we quantified the binding free energies (ΔGbind) of GDP to wild-type (WT) KRas and its key oncogenic mutants G12C, G12D, G12R, and G12V, with and without MRTX1133 a potential inhibitor of the KRas G12D variant.”0.82literature_variant_regex_v2
variantG12D“Using steered molecular simulations we quantified the binding free energies (ΔGbind) of GDP to wild-type (WT) KRas and its key oncogenic mutants G12C, G12D, G12R, and G12V, with and without MRTX1133 a potential inhibitor of the KRas G12D variant.”0.82literature_variant_regex_v2
variantG12R“Using steered molecular simulations we quantified the binding free energies (ΔGbind) of GDP to wild-type (WT) KRas and its key oncogenic mutants G12C, G12D, G12R, and G12V, with and without MRTX1133 a potential inhibitor of the KRas G12D variant.”0.82literature_variant_regex_v2
variantG12V“Using steered molecular simulations we quantified the binding free energies (ΔGbind) of GDP to wild-type (WT) KRas and its key oncogenic mutants G12C, G12D, G12R, and G12V, with and without MRTX1133 a potential inhibitor of the KRas G12D variant.”0.82literature_variant_regex_v2

Advances in Targeted Therapy for Non-Small-Cell Lung Cancer: Current Progress and Future Directions.

PMID 41373672 | PMCID PMC12692500 | DOI 10.3390/ijms262311517 · International journal of molecular sciences · 2025 · 4 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“This review highlights the evolving landscape of therapeutic strategies for actionable mutations in lung cancer, with particular attention given to the latest developments in KRAS-targeted treatments including non-G12C mutations, pan-RAS inhibitors, and agents targeting RAS-GTP.”0.82literature_variant_regex_v2
geneEGFR“We also examine the existing standards of care for NSCLC harboring EGFR and ALK alterations, as well as emerging therapies poised for clinical use.”0.98hgnc_dict_v1
geneROS1“Additional discussion includes advancements in therapies directed at MET, HER2, RET, ROS1, and FGFR alterations-each representing promising targets in NSCLC.”0.98hgnc_dict_v1
phenotypelung cancer“Advances in Targeted Therapy for Non-Small-Cell Lung Cancer: Current Progress and Future Directions.”0.98phenotype_alias_lexicon_v2

Targeting KRAS-G12C in lung cancer: The emerging role of PROTACs in overcoming resistance.

PMID 40233529 | DOI 10.1016/j.prp.2025.155954 · Pathology, research and practice · 2025 · 3 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“In lung cancer, KRAS mutations, especially the G12C, favor aggressive tumor growth and resistance to standard therapies.”0.82literature_variant_regex_v2
geneKRAS“In lung cancer, KRAS mutations, especially the G12C, favor aggressive tumor growth and resistance to standard therapies.”0.98hgnc_dict_v1
phenotypelung cancer“Targeting KRAS-G12C in lung cancer: The emerging role of PROTACs in overcoming resistance.”0.98phenotype_alias_lexicon_v2

Exploring KRas Protein Dynamics: An Integrated Molecular Dynamics Analysis of KRas Wild and Mutant Variants.

PMID 39035919 | PMCID PMC11256348 | DOI 10.1021/acsomega.4c02671 · ACS omega · 2024 · 4 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“This study employs a comprehensive approach combining protein retrieval, sequence alignment, and molecular dynamics simulations to investigate the structural dynamics and stability of wild-type KRas and its mutated variants (G12C, G12D, G12V, and G13D).”0.82literature_variant_regex_v2
variantG12D“This study employs a comprehensive approach combining protein retrieval, sequence alignment, and molecular dynamics simulations to investigate the structural dynamics and stability of wild-type KRas and its mutated variants (G12C, G12D, G12V, and G13D).”0.82literature_variant_regex_v2
variantG12V“This study employs a comprehensive approach combining protein retrieval, sequence alignment, and molecular dynamics simulations to investigate the structural dynamics and stability of wild-type KRas and its mutated variants (G12C, G12D, G12V, and G13D).”0.82literature_variant_regex_v2
variantG13D“This study employs a comprehensive approach combining protein retrieval, sequence alignment, and molecular dynamics simulations to investigate the structural dynamics and stability of wild-type KRas and its mutated variants (G12C, G12D, G12V, and G13D).”0.82literature_variant_regex_v2

Flavonoids as potential KRAS inhibitors: DFT, molecular docking, molecular dynamics simulation and ADMET analyses.

PMID 38647682 | DOI 10.1080/10286020.2024.2343821 · Journal of Asian natural products research · 2024 · 3 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“A novel avenue for the control of KRAS G12C and G12D mutations is made possible by flavonoids.”0.82literature_variant_regex_v2
geneKRAS“Flavonoids as potential KRAS inhibitors: DFT, molecular docking, molecular dynamics simulation and ADMET analyses.”0.98hgnc_dict_v1
variantG12D“A novel avenue for the control of KRAS G12C and G12D mutations is made possible by flavonoids.”0.82literature_variant_regex_v2
TypeEntitySource evidenceConfidenceExtractor
variantG12C“In KRAS, mutations of G12D and G12C are common.”0.82literature_variant_regex_v2
geneKRAS“In KRAS, mutations of G12D and G12C are common.”0.98hgnc_dict_v1
variantG12D“In KRAS, mutations of G12D and G12C are common.”0.82literature_variant_regex_v2

Identifying colorectal cancer caused by biallelic MUTYH pathogenic variants using tumor mutational signatures.

PMID 35668106 | PMCID PMC9170691 | DOI 10.1038/s41467-022-30916-1 · Nature communications · 2022 · 6 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantp.G12C“Somatic hotspot mutations KRAS p.G12C and PIK3CA p.Q546K are associated with colorectal cancers from biallelic MUTYH carriers compared with non-carriers (p = 2 × 10-23 and p = 6 × 10-11, respectively).”0.95hgvs_regex_v1
geneMUTYH“Identifying colorectal cancer caused by biallelic MUTYH pathogenic variants using tumor mutational signatures.”0.98hgnc_dict_v1
geneKRAS“Somatic hotspot mutations KRAS p.G12C and PIK3CA p.Q546K are associated with colorectal cancers from biallelic MUTYH carriers compared with non-carriers (p = 2 × 10-23 and p = 6 × 10-11, respectively).”0.98hgnc_dict_v1
genePIK3CA“Somatic hotspot mutations KRAS p.G12C and PIK3CA p.Q546K are associated with colorectal cancers from biallelic MUTYH carriers compared with non-carriers (p = 2 × 10-23 and p = 6 × 10-11, respectively).”0.98hgnc_dict_v1

KRAS G12C-Mutant Non-Small-Cell Lung Adenocarcinoma: First Documented Report in the Arabian Gulf.

PMID 36004014 | PMCID PMC9391965 | DOI 10.7759/cureus.27090 · Cureus · 2022 · 3 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantG12C“We report the first documented case series of two lung adenocarcinoma patients demonstrating Kirsten rat sarcoma viral oncogene homolog (KRAS) G12C mutations by reverse transcription-polymerase chain reaction techniques from Saudi Arabia.”0.82literature_variant_regex_v2
geneKRAS“KRAS G12C-Mutant Non-Small-Cell Lung Adenocarcinoma: First Documented Report in the Arabian Gulf.”0.98hgnc_dict_v1
populationSaudi Arabia“We report the first documented case series of two lung adenocarcinoma patients demonstrating Kirsten rat sarcoma viral oncogene homolog (KRAS) G12C mutations by reverse transcription-polymerase chain reaction techniques from Saudi Arabia.”0.95saudi_context_rules_v1