Advanced search

Combine gene, variant, phenotype, region and year filters

Every result shows the extracted entities next to the sentences that support them; rows for the searched entities come first.

Transparent by designEvery result links extracted entities to its source sentence and publication identifier.

Publications

9 records shown · first 60
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“Given the strong genetic basis underlying the pathogenesis of T2DM and CAD, this study aimed to investigate the potential significance of the following genetic variants in the pathogenesis of CAD with and without T2DM comorbidity: hepatocyte nuclear factor-1 alpha (HNF1A) [p.I27L] rs1169288, glutathione S-transferase Pi 1 (GSTP1) rs1695 (A>G; Ile→Val), transcription factor 7-like 2 (TCF7L2) rs7903146 (C>T), and long non-coding RNA H19 (LncRNA H19) rs217727 (C>T).”0.90hgvs_regex_v1
geneGSTP1“Molecular Characterization and Impact of the Genetic Variants GSTP1, LncRNA H19, TCF7L2 and HNF1A on the Risk of Coronary Artery Disease With and Without T2DM Comorbidity: A Genomic Biomarker Study.”0.98hgnc_dict_v1
geneH19“Molecular Characterization and Impact of the Genetic Variants GSTP1, LncRNA H19, TCF7L2 and HNF1A on the Risk of Coronary Artery Disease With and Without T2DM Comorbidity: A Genomic Biomarker Study.”0.98hgnc_dict_v1
geneTCF7L2“Molecular Characterization and Impact of the Genetic Variants GSTP1, LncRNA H19, TCF7L2 and HNF1A on the Risk of Coronary Artery Disease With and Without T2DM Comorbidity: A Genomic Biomarker Study.”0.98hgnc_dict_v1

Interaction between the TCF7L2 gene and dietary intake on metabolic syndrome risk factors among Saudi Arabian adults.

PMID 40170676 | PMCID PMC11960299 | DOI 10.3389/fnut.2025.1513088 · Frontiers in nutrition · 2025 · 6 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“The single-nucleotide polymorphism (SNP) rs7903146 in TCF7L2 in T2D interacts with dietary factors; however, research on nutrigenetics among Saudi Arabians is limited.”0.90hgvs_regex_v1
geneTCF7L2“Interaction between the TCF7L2 gene and dietary intake on metabolic syndrome risk factors among Saudi Arabian adults.”0.98hgnc_dict_v1
phenotypemetabolic syndrome“Interaction between the TCF7L2 gene and dietary intake on metabolic syndrome risk factors among Saudi Arabian adults.”0.98phenotype_alias_lexicon_v2
phenotypeobesity“METHODS: This cross-sectional study included 271 adult participants (aged 20-55 years) of both genders with or without overweight or obesity (body mass index between 18-35 kg/m2).”0.98phenotype_alias_lexicon_v2
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“The purpose of this study was to investigate the genes associated with β-cell dysfunction and their genetic roles in the rs7903146, rs2237892, and rs5219 variants in Saudi women diagnosed with type 2 diabetes mellitus and GDM.”0.90hgvs_regex_v1
geneTCF7L2“TCF7L2, KCNQ1, and KCNJ11 genes are connected to the mechanism of β-cell dysfunction.”0.98hgnc_dict_v1
geneKCNQ1“TCF7L2, KCNQ1, and KCNJ11 genes are connected to the mechanism of β-cell dysfunction.”0.98hgnc_dict_v1
geneKCNJ11“TCF7L2, KCNQ1, and KCNJ11 genes are connected to the mechanism of β-cell dysfunction.”0.98hgnc_dict_v1
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“Genomic DNA was extracted and genotype of common variants (rs7903146 C/T and rs12255372 G/T) was carried out by amplification-refractory mutation system (ARMS)-PCR of sequence specific oligonucleotides.”0.90hgvs_regex_v1
geneTCF7L2“Associations of transcription factor 7-Like 2 (TCF7L2) gene polymorphism in patients of type 2 diabetes mellitus from Khyber Pakhtunkhwa population of Pakistan.”0.98hgnc_dict_v1
phenotypediabetes mellitus“Associations of transcription factor 7-Like 2 (TCF7L2) gene polymorphism in patients of type 2 diabetes mellitus from Khyber Pakhtunkhwa population of Pakistan.”0.98phenotype_alias_lexicon_v2
phenotypemetabolic syndrome“BACKGROUND: Type 2 diabetes mellitus (T2DM) is the most prevalent component of metabolic syndrome.”0.98phenotype_alias_lexicon_v2
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“The strongest locus which associated with type 2 diabetes (T2D) by the common variant rs7903146 is the transcription factor 7-like 2 gene (TCF7L2).”0.90hgvs_regex_v1
geneTCF7L2“Interaction of Diet/Lifestyle Intervention and TCF7L2 Genotype on Glycemic Control and Adiposity among Overweight or Obese Adults: Big Data from Seven Randomized Controlled Trials Worldwide.”0.98hgnc_dict_v1
phenotypeobesity“Interaction of Diet/Lifestyle Intervention and TCF7L2 Genotype on Glycemic Control and Adiposity among Overweight or Obese Adults: Big Data from Seven Randomized Controlled Trials Worldwide.”0.93phenotype_alias_lexicon_v2
phenotypediabetes mellitus“The strongest locus which associated with type 2 diabetes (T2D) by the common variant rs7903146 is the transcription factor 7-like 2 gene (TCF7L2).”0.93phenotype_alias_lexicon_v2
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“OBJECTIVE: We studied the association of single nucleotide polymorphisms (SNPs) rs7903146, rs12255372 and rs4506565 in type 2 diabetes mellitus (T2DM) susceptibility gene, transcription factor 7 like 2 (TCF7L2) with T2DM among the population of the Eastern Province of Saudi Arabia.”0.90hgvs_regex_v1
geneTCF7L2“Type 2 diabetes mellitus susceptibility gene TCF7L2 is strongly associated with hyperglycemia in the Saudi Arabia Population of the eastern province of Saudi Arabia.”0.98hgnc_dict_v1
phenotypediabetes mellitus“Type 2 diabetes mellitus susceptibility gene TCF7L2 is strongly associated with hyperglycemia in the Saudi Arabia Population of the eastern province of Saudi Arabia.”0.98phenotype_alias_lexicon_v2
populationSaudi Arabia, Eastern Province“Type 2 diabetes mellitus susceptibility gene TCF7L2 is strongly associated with hyperglycemia in the Saudi Arabia Population of the eastern province of Saudi Arabia. OBJECTIVE: We studied the association of single nucleotide polymorphisms (SNPs) rs7903146, rs12255372 and rs4506565 in type 2 diabetes mellitus (T2DM) susceptibility gene, transcription factor 7 like 2 (TCF7L2) with T2DM among the population of the Eastern Province of Saudi Arabia. PATIENTS AND METHODS: In a case-control study, blood samples were collected from 359 T2DM patients and 351 age and sex-matched normoglycemic controls. RESULTS: Our results revealed a strong association between risk T alleles in variants rs12255372 (OR: G/T=1.4233; T/T=2.0395) and rs4506565 (OR: A/T=1.6066; T/T=3.1301) and T2DM among the Saudi population of the Eastern Province of Saudi Arabia. This is the first time that this association has been identified in a Saudi population. These data further strengthens the hypothesis that Saudi populations might carry a distinct risk allele in T2DM susceptibility gene TCF7L2. CONCLUSIONS: The present results confirm that rs12255372 and rs4506565 variants of TCF7L2 show an association, but not rs7903146, with T2DM for the Saudi population of the Eastern Province of Saudi Arabia.”0.95saudi_context_rules_v1

Association between type 2 diabetes mellitus-related SNP variants and obesity traits in a Saudi population.

PMID 24435973 | DOI 10.1007/s11033-014-3022-z · Molecular biology reports · 2014 · 7 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“Variants of SNPs rs7903146, rs1552224 and rs11642841 in the control group and rs7903146 in T2DM group showed significant association with both BMI and WC.”0.90hgvs_regex_v1
phenotypeobesity“Association between type 2 diabetes mellitus-related SNP variants and obesity traits in a Saudi population.”0.98phenotype_alias_lexicon_v2
phenotypediabetes mellitus“Association between type 2 diabetes mellitus-related SNP variants and obesity traits in a Saudi population.”0.93phenotype_alias_lexicon_v2
populationSaudi Arabia“Association between type 2 diabetes mellitus-related SNP variants and obesity traits in a Saudi population. In addition to the environmental factors, genetic factors may also contribute to the ongoing obesity epidemic in Saudi Arabia. This study investigated the association between variants of 36 previously established T2DM SNPs and obesity phenotypes in a population of Saudi subjects. Study subjects consisted of 975 obese (BMI: ≥30), 825 overweight (25-30) and 423 lean controls (18-25) and of these 927 had a history of T2DM.”0.95saudi_context_rules_v1
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“It was found that TCF7L2 rs7903146 was significantly associated with a pooled OR of 1.155 (95%C.I.=1.059-1.259), p<0.0001 and I(2)=78.30% among the Arab population, whereas among Caucasians, the pooled OR was 1.45 (95%C.I.=1.386-1.516), p<0.0001 and I(2)=77.20%.”0.90hgvs_regex_v1
geneACE“ACE I/D and MTHFR C677T polymorphisms are significantly associated with type 2 diabetes in Arab ethnicity: a meta-analysis.”0.98hgnc_dict_v1
geneMTHFR“ACE I/D and MTHFR C677T polymorphisms are significantly associated with type 2 diabetes in Arab ethnicity: a meta-analysis.”0.98hgnc_dict_v1
geneTCF7L2“It was found that TCF7L2 rs7903146 was significantly associated with a pooled OR of 1.155 (95%C.I.=1.059-1.259), p<0.0001 and I(2)=78.30% among the Arab population, whereas among Caucasians, the pooled OR was 1.45 (95%C.I.=1.386-1.516), p<0.0001 and I(2)=77.20%.”0.98hgnc_dict_v1

Weak or no association of TCF7L2 variants with Type 2 diabetes risk in an Arab population.

PMID 18655717 | PMCID PMC2515290 | DOI 10.1186/1471-2350-9-72 · BMC medical genetics · 2008 · 5 validated mentions
TypeEntitySource evidenceConfidenceExtractor
variantrs7903146“BACKGROUND: The rs7903146 and rs12255372 variants of TCF7L2 have been strongly associated with type 2 diabetes (T2D) risk in most populations studied to date.”0.90hgvs_regex_v1
geneTCF7L2“Weak or no association of TCF7L2 variants with Type 2 diabetes risk in an Arab population.”0.98hgnc_dict_v1
phenotypediabetes mellitus“Weak or no association of TCF7L2 variants with Type 2 diabetes risk in an Arab population.”0.93phenotype_alias_lexicon_v2
populationSaudi Arabia“METHODS: We performed a case-control association study using 522 Saudi T2D patients (WHO criteria), and 346 controls (age > 60; fasting plasma glucose < 7 mmol/L).”0.95saudi_context_rules_v1